BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024A11SP1|AL428154
(930 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1631 1699 0.0
>3x_Contig1631
Length = 12284
Score = 1699 bits (848), Expect = 0.0
Identities = 895/918 (97%), Gaps = 2/918 (0%)
Strand = Plus / Minus
Query: 13 cactggcagtgttaycttcaccggtggctctagcacctyaacttcgagctggtgacccgt 72
|||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 9465 cactggcagtgttaccttcaccggtggctctagcacctcaacttcga-ctggt-acccgt 9408
Query: 73 agctctagcagtggctcctcttcttcatcttccaacagttcctcatcagccagcagctca 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9407 agctctagcagtggctcctcttcttcatcttccaacagttcctcatcagccagcagctca 9348
Query: 133 tcagattcaaaagamagctccggtgtttacaagaccaacgttccattgtactccgtattg 192
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9347 tcagattcaaaagacagctccggtgtttacaagaccaacgttccattgtactccgtattg 9288
Query: 193 astgcctgcgttgttaccattttcaccgttgctggtgctggattgataatgatttgagtt 252
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9287 actgcctgcgtcgttaccattttcaccgttgctggtgctggattgataatgatttgagtt 9228
Query: 253 aaatcataacaaaatcacggacaagacatatcactcgtatatctatatttawwaagaata 312
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 9227 aaatcataacaaaatcacggacaagacatatcactcgtatatctatatttaaaaagaata 9168
Query: 313 tgattcaatttcaacaataaaagtatagctaccctgtttatatcttcatttctcgtacac 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9167 tgattcaatttcaacaataaaagtatagctaccctgtttatatcttcatttctcgtacac 9108
Query: 373 catatgaggaaggactttgatyataagatcctttctgttggttctyacttttctatttga 432
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 9107 catatgaggaaggactttgatcataagatcctttctgttggttctcacttttctatttga 9048
Query: 433 acgatcaattgattaagggcataatttgcggtcttccttaaatgaagacacttactgagt 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9047 acgatcaattgattaagggcataatttgcggtcttccttaaatgaagacacttactgagt 8988
Query: 493 gtagcaaaattgacgatgatttatgatcatatatatrctatactgcactgttcgcaagtg 552
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 8987 gtagcaaaattgacgatgatttatgatcatatatatactatactgcactgttcgcaagtg 8928
Query: 553 ttgttaaaaaaaagtccagttaattggttcgaattatgtgcsttgaaacaattcaaagat 612
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 8927 ttgttaaaaaaaagtccagttaattggttcgaattatgtgccttgaaacaattcaaagat 8868
Query: 613 ttctttatatagctatgaagaacctctagatctttctcatcgaatgcctgctcgtaattg 672
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8867 ttctttatatagcaatgaagaacctctagatctttctcatcgaatgcctgctcgtaattg 8808
Query: 673 ttgttacacaagcagctcatcaatccaaaaatggctcttacccatatcgaaccattcgcc 732
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8807 ttgtaacacaagcagctcatcaatccaaaaatggctcttacccatatcgaaccattcgcc 8748
Query: 733 aaaaatcatgaactaggttcgaaagacattgttcaacgcactgcgcacataactatcaca 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8747 aaaaatcatgaactaggttcgaaagacattgttcaacgcactgcgcacataactatcaca 8688
Query: 793 ctttcagcaatctaaatagctatactaaaatgaaaagracaatatttactgatraccgtw 852
||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 8687 ctttcagcaatctaaatagctatactaaaatgaaaagaacaatatttactgataaccgta 8628
Query: 853 aatagcagttagcrtaaacacgggggatggtccacattttctgctcttacgccatagcaa 912
||||||||| ||| ||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 8627 aatagcagtaagcataaacacggggaatggtccacattttctgctcttacgcaatagcaa 8568
Query: 913 ggscctttttgctcattt 930
|| |||||||||||||||
Sbjct: 8567 ggccctttttgctcattt 8550
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6872
Number of Sequences: 1807
Number of extensions: 6872
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)